The tiledbsoma.io module

Functions

tiledbsoma.io.from_h5ad	Reads an .h5ad file and writes it to an Experiment.
tiledbsoma.io.from_anndata	Writes an AnnData object to an Experiment.
tiledbsoma.io.add_X_layer	This is useful for adding X data, for example from Scanpy's scanpy.pp.normalize_total, scanpy.pp.log1p, etc.
tiledbsoma.io.add_matrix_to_collection	This is useful for adding X/obsp/varm/etc data, for example from Scanpy's scanpy.pp.normalize_total, scanpy.pp.log1p, etc.
tiledbsoma.io.create_from_matrix	Create and populate the soma_matrix from the contents of matrix.
tiledbsoma.io.to_h5ad	Converts the experiment group to AnnData format and writes it to the specified .h5ad file.
tiledbsoma.io.to_anndata	Converts the experiment group to AnnData format.